Yes. Disabling Fences reverts my desktop back to normal, and I am able to see all the icons.
The earlier problem with my icons disappearing is not always 100% consistent. Sometimes they will be there; sometimes they won't. After uninstalling and reinstalling, they were there, but then after using my desktop for a little bit, I had this weird box glitch again. I took a video of me interacting with it:
Basically, it is something to do with Fences because if I put it next to the rolled-up fence and then expand it, the box will snap to the fence... Once I double-click on the box, then the icons will appear again (which happens towards the end of the video). Otherwise, it will just be able to be dragged anywhere to the desktop, and nothing will happen.
I think it's a little weird that the only way to get support is to post my videos of all my files for the whole world to see, but ok
Here is the video
Click to download files: https://file.kiwi/25155897#oC-M_UP1NNnPALfndCikLg
If someone has a more normal way to embed the video, if you don't mind doing it for me, it would be appreciated.