As I play more, I realized it is NOT all scout icons, but its definitely not assigning the right icons...
So far the majority of my ships has scout icons (including my survery ships, colony ships, construction ships, etc )...
but my beam destroyer has the survey icon (no it does not have the survey modules)
and my prototype ships (the ones that requires rare minerals like Eluerium) has the somewhat correct attackers icons....
Playing on a huge map it is getting difficult... For now I have to rename my fleets so I know what they are when I zoomed out.
I think not everyone is having this problems (or not everyone is playing with an antire fleet of custom design ships).... but if anyone has any ideas of a fix/workaround, hack the code etc I am all ears...